Compiling Pargenes¶
Author: | Brant C. Faircloth |
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Copyright: | This documentation is available under a Creative Commons (CC-BY) license. |
Steps¶
Checkout the source code for pargenes from github
git clone --recursive https://github.com/BenoitMorel/ParGenes.git pargenes
Pargenes needs a couple of things to compile, including Cmake and MPI. To get what we need on Supermike/Supermic:
module load intel/18.0.0 module load gcc/6.4.0 module load impi/2018.0.128
We also need to tell Cmake which compilers we want for it to use
export CC=`which gcc` export CXX=`which g++`
Now we should be able to compile:
cd pargenes ./install.sh